Earth and Environmental Sciences Area Logo Earth and Environmental Sciences Area Logo
Lawrence Berkeley National Laboratory Logo
Menu
  • About Us
    • Contact Us
    • Organizational Charts
    • Virtual Tours
    • EESA Strategic Vision
  • Our People
    • A-Z People
    • Alumni Network
    • Area Offices
    • Committees
    • Directors
    • IDEA Working Group
    • Paul A. Witherspoon
    • Postdocs & Early Careers
    • Search by Expertise
  • Careers & Opportunities
    • Careers
    • Intern Pilot w/CSUEB
    • Mentorship Program
    • Recognition & Funding Opps
    • EESA Mini Grants
    • S&E Metrics for Performance and Promotion
    • Student Opportunities
    • Supervisor EnRichment (SupER) Program
    • Promotion Metrics (Scientific)
  • Research
    • Area-Wide Program Domain
      • Earth AI & Data
    • Our Divisions
    • Climate & Ecosystem Sciences Division
      • Environmental & Biological Systems Science
        • Programs
        • Environmental Remediation & Water Resources
        • Ecosystems Biology Program
        • Bioenergy
      • Biosphere-Atmosphere Interactions
        • Programs
        • Climate Modeling
        • Atmospheric System Research
        • Terrestrial Ecosystem Science
      • Climate & Atmosphere Processes
        • Programs
        • Climate Modeling
        • Atmospheric System Research
      • Earth Systems & Society
        • Programs
        • Climate Modeling
    • Energy Geosciences Division
      • Discovery Geosciences
        • Programs
        • Basic Energy Sciences (BES) Geophysics
        • Basic Energy Sciences (BES) Geochemistry
        • Basic Energy Sciences (BES) Isotope
      • Energy Resources and Carbon Management
        • Programs
        • Carbon Removal & Mineralization Program
        • Carbon Storage Program
        • Geothermal Systems
        • Hydrocarbon Science
        • Nuclear Energy & Waste
      • Resilient Energy, Water & Infrastructure
        • Programs
        • Water-Energy
        • Critical Infrastructure
        • Environmental Resilience
        • Grid-Scale Subsurface Energy Storage
        • National Alliance for Water Innovation (NAWI)
    • Projects
    • Research at a Glance
    • Publication Lists
    • Centers and Resources
    • Technologies & National User Programs
  • Departments
    • Climate Sciences
    • Ecology
    • Geochemistry
    • Geophysics
    • Hydrogeology
    • Operations
  • News & Events
    • News
    • Events
    • Earth & Environment Newsletter
  • Intranet
  • Safety
    • EESA Safety
  • FoW
  • Search

  • all
  • people
  • events
  • posts
  • pages
  • projects
  • publications

Dead or alive? Modeling how microorganisms in soil shape the global carbon cycle2 min read

by niba on March 3, 2022

Climate and Ecosystem Sciences Division

Living soil microorganisms are extremely powerful and incredibly diverse biogeochemical engines driving the turnover of organic matter in the terrestrial biosphere. However, it is not only in life that microbes control the future of the global carbon cycle and Earth system productivity. In fact, dead microbial biomass, or necromass, is one of the largest stocks of organic carbon on Earth, making up as much as 50 percent of the total soil organic carbon pool. A new review appearing in Nature Reviews Microbiology, co-authored by Eoin Brodie and Gianna Marschmann of EESA , outlines how it is now possible to leverage new conceptual understanding, emerging technologies and modeling capabilities to predict how the life and death of soil microbes may impact the planet’s soil carbon stocks. 

“Here at Berkeley Lab, we are most excited about new opportunities to develop a robust, data-driven foundation for integrating the microbial ecology of life and death into forecasts of biogeochemical models, from the global system-level scale all the way down to the molecular scale of mineral/carbon/water/microbe/plant interfaces” said Gianna Marschmann, a postdoc in the Department of Energy’s Genomic Sciences program “Microbes Persist” Soil Microbiome Scientific Focus Area led by Lawrence Livermore National Laboratory. Together with Jinyun Tang and Ulas Karaoz, staff and research scientists in EESA, the team is developing computational workflows to connect microbial traits inferred from genome sequences with trait-based microbial models as a foundation for enabling multiscale microbial modeling. The computational pipeline, outlined in the review article, will be part of the Department of Energy’s Systems Biology Knowledgebase (KBase), providing new community capabilities that will enable researchers to inform and benchmark biogeochemical models with trait-based data, ultimately enhancing our understanding of Earth’s microbial engines and their impact on changes to the global carbon cycle. 

Read the news release issued by Lawrence Livermore National Laboratory here.

News & Events

Study Sheds Light on Microbial Communities in Earth’s Subsurface2 min read

August 16, 2023

  From the tops of tree canopies to the bottom of groundwater reservoirs, a vast amount of living organisms interact with nonliving components such as rock, water, and soil to shape this area of Earth known as the “critical zone.” Over half of Earth’s microbes are located in the subsurface critical zone, which ranges from…

Carl Steefel Honored in Goldschmidt Session on Reactive Transport2 min read

August 2, 2023

The contributions of Carl Steefel to the reactive transport modeling scientific community were recognized in a session held in his honor at the recent Goldschmidt 2023 conference (Lyon, France). Goldschmidt is the foremost annual, international conference on geochemistry and related subjects, organized by the European Association of Geochemistry and the Geochemical Society. The session was…

DOE Funds Projects to Advance Forest Carbon Dioxide Removal Efforts and Agricultural Soil Carbon Conservation4 min read

August 1, 2023

The DOE Office of Fossil Energy and Carbon Management (FECM) and Office of Technology Transitions (OTT) recently announced $5 million in funding for four projects–two from Berkeley Lab with EESA leadership. The projects selected offer “promising solutions” to the nation’s climate change challenges by helping to reduce greenhouse gas emissions and will “accelerate their deployment…

Quantifying the strength of the land carbon sink3 min read

July 26, 2023

This article first appeared at nature.berkeley.edu/news. The world’s forests, grasslands, and other terrestrial ecosystems have played a substantial role in offsetting human carbon emissions—a capability that UC Berkeley researchers say would be threatened by continued global change. The assessment, published today as a new review paper in Nature Reviews Earth & Environment, presents a comprehensive analysis of…

  • Our People
    • Area Offices
    • Committees
    • Directors
    • Organizational Charts
    • Postdocs
    • Staff Only
    • Search by Expertise
  • Departments
    • Climate Sciences
    • Ecology
    • Geochemistry
    • Geophysics
    • Hydrogeology
  • Research
    • Climate & Ecosystem Sciences Division
    • Energy Geosciences Division
    • Program Domains
      • Programs
    • Projects
  • Contact
    • 510 486 6455
    • eesawebmaster@lbl.gov
    • Our Identity

Earth and Environmental Sciences Area Logo DOE Earth and Environmental Sciences Area Logo UC

A U.S. Department of Energy National Laboratory Managed by the University of California

Lawrence Berkeley National Laboratory · Earth and Environmental Sciences Area · Privacy & Security Notice